Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Pdlim1O70400 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
Pdlim1O70400 Mir8117-201ENSMUST00000184773 107 ntBASIC14.96□□□□□ -0.01
Pdlim1O70400 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.96□□□□□ -0.01
Pdlim1O70400 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.96□□□□□ -0.01
Pdlim1O70400 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.96□□□□□ -0.01
Pdlim1O70400 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pdlim1O70400 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pdlim1O70400 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.96□□□□□ -0.02
Pdlim1O70400 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.96□□□□□ -0.02
Pdlim1O70400 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pdlim1O70400 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.95□□□□□ -0.02
Pdlim1O70400 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim1O70400 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim1O70400 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.95□□□□□ -0.02
Pdlim1O70400 Gm43767-201ENSMUST00000198933 381 ntBASIC14.95□□□□□ -0.02
Pdlim1O70400 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.95□□□□□ -0.02
Pdlim1O70400 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim1O70400 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.95□□□□□ -0.02
Pdlim1O70400 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim1O70400 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim1O70400 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Pdlim1O70400 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim1O70400 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim1O70400 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms