Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim3O70209 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim3O70209 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.77□□□□□ -0.21
Pdlim3O70209 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.77□□□□□ -0.21
Pdlim3O70209 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pdlim3O70209 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim3O70209 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.76□□□□□ -0.21
Pdlim3O70209 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Rprl3-201ENSMUST00000157400 290 ntBASIC13.76□□□□□ -0.21
Pdlim3O70209 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.76□□□□□ -0.21
Pdlim3O70209 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.76□□□□□ -0.21
Pdlim3O70209 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.76□□□□□ -0.21
Pdlim3O70209 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim3O70209 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim3O70209 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pdlim3O70209 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim3O70209 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim3O70209 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim3O70209 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.75□□□□□ -0.21
Pdlim3O70209 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.75□□□□□ -0.21
Pdlim3O70209 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.75□□□□□ -0.21
Pdlim3O70209 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pdlim3O70209 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim3O70209 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim3O70209 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms