Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rpl35aO55142 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl35aO55142 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.32□□□□□ -0.6
Rpl35aO55142 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.32□□□□□ -0.6
Rpl35aO55142 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.32□□□□□ -0.6
Rpl35aO55142 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl35aO55142 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.31□□□□□ -0.6
Rpl35aO55142 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.31□□□□□ -0.6
Rpl35aO55142 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.31□□□□□ -0.6
Rpl35aO55142 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpl35aO55142 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.31□□□□□ -0.6
Rpl35aO55142 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl35aO55142 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Rpl35aO55142 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpl35aO55142 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.3□□□□□ -0.6
Rpl35aO55142 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpl35aO55142 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.3□□□□□ -0.6
Rpl35aO55142 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl35aO55142 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms