Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
Trdmt1O55055 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.65■□□□□ 0.26
Trdmt1O55055 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.65■□□□□ 0.26
Trdmt1O55055 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.65■□□□□ 0.26
Trdmt1O55055 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.65■□□□□ 0.26
Trdmt1O55055 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.65■□□□□ 0.26
Trdmt1O55055 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.65■□□□□ 0.26
Trdmt1O55055 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdmt1O55055 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.65■□□□□ 0.26
Trdmt1O55055 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trdmt1O55055 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.64■□□□□ 0.25
Trdmt1O55055 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.64■□□□□ 0.25
Trdmt1O55055 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Gm43767-201ENSMUST00000198933 381 ntBASIC16.64■□□□□ 0.25
Trdmt1O55055 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trdmt1O55055 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.64■□□□□ 0.25
Trdmt1O55055 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trdmt1O55055 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.64■□□□□ 0.25
Trdmt1O55055 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.63■□□□□ 0.25
Trdmt1O55055 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Gm2423-201ENSMUST00000074863 733 ntBASIC16.63■□□□□ 0.25
Trdmt1O55055 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdmt1O55055 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trdmt1O55055 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
Trdmt1O55055 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
Trdmt1O55055 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Celf4-206ENSMUST00000224553 1729 ntBASIC16.62■□□□□ 0.25
Trdmt1O55055 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trdmt1O55055 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Gm9063-201ENSMUST00000223299 582 ntBASIC16.62■□□□□ 0.25
Trdmt1O55055 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Trdmt1O55055 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.62■□□□□ 0.25
Trdmt1O55055 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trdmt1O55055 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdmt1O55055 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdmt1O55055 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.61■□□□□ 0.25
Trdmt1O55055 Gm14767-201ENSMUST00000121559 586 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms