Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.59□□□□□ -0.39
SncaO55042 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.59□□□□□ -0.39
SncaO55042 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Gm44454-201ENSMUST00000198541 138 ntBASIC12.59□□□□□ -0.39
SncaO55042 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SncaO55042 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.59□□□□□ -0.39
SncaO55042 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SncaO55042 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SncaO55042 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SncaO55042 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SncaO55042 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SncaO55042 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SncaO55042 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SncaO55042 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SncaO55042 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.58□□□□□ -0.4
SncaO55042 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SncaO55042 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.58□□□□□ -0.4
SncaO55042 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SncaO55042 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SncaO55042 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
SncaO55042 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.58□□□□□ -0.4
SncaO55042 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SncaO55042 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SncaO55042 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
SncaO55042 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SncaO55042 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SncaO55042 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.57□□□□□ -0.4
SncaO55042 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.57□□□□□ -0.4
SncaO55042 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SncaO55042 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.57□□□□□ -0.4
SncaO55042 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SncaO55042 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SncaO55042 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SncaO55042 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms