Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
BckdkO55028 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
BckdkO55028 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
BckdkO55028 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
BckdkO55028 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.1□□□□□ -0.15
BckdkO55028 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BckdkO55028 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.1□□□□□ -0.15
BckdkO55028 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.1□□□□□ -0.15
BckdkO55028 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BckdkO55028 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 BC037039-201ENSMUST00000192003 2205 ntBASIC14.1□□□□□ -0.15
BckdkO55028 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BckdkO55028 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.09□□□□□ -0.15
BckdkO55028 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BckdkO55028 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
BckdkO55028 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Gm13036-201ENSMUST00000117799 748 ntBASIC14.09□□□□□ -0.15
BckdkO55028 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
BckdkO55028 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.09□□□□□ -0.15
BckdkO55028 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.09□□□□□ -0.15
BckdkO55028 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BckdkO55028 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
BckdkO55028 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.08□□□□□ -0.15
BckdkO55028 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
BckdkO55028 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
BckdkO55028 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BckdkO55028 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.08□□□□□ -0.16
BckdkO55028 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.08□□□□□ -0.16
BckdkO55028 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.08□□□□□ -0.16
BckdkO55028 Gm15467-201ENSMUST00000120582 445 ntBASIC14.08□□□□□ -0.16
BckdkO55028 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.08□□□□□ -0.16
BckdkO55028 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.08□□□□□ -0.16
BckdkO55028 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.08□□□□□ -0.16
BckdkO55028 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.08□□□□□ -0.16
BckdkO55028 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.08□□□□□ -0.16
BckdkO55028 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BckdkO55028 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BckdkO55028 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BckdkO55028 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms