Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cldn5O54942 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cldn5O54942 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cldn5O54942 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.73■□□□□ 0.11
Cldn5O54942 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.73■□□□□ 0.11
Cldn5O54942 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Gm10154-201ENSMUST00000084445 354 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.73■□□□□ 0.11
Cldn5O54942 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
Cldn5O54942 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.73■□□□□ 0.11
Cldn5O54942 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldn5O54942 Asic1-205ENSMUST00000228185 1818 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.73■□□□□ 0.11
Cldn5O54942 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cldn5O54942 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Cldn5O54942 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Cldn5O54942 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Cldn5O54942 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.72■□□□□ 0.11
Cldn5O54942 Rpph1-201ENSMUST00000175096 319 ntBASIC15.72■□□□□ 0.11
Cldn5O54942 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.72■□□□□ 0.11
Cldn5O54942 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.72■□□□□ 0.11
Cldn5O54942 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.72■□□□□ 0.11
Cldn5O54942 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cldn5O54942 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn5O54942 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cldn5O54942 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Cldn5O54942 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.71■□□□□ 0.11
Cldn5O54942 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.71■□□□□ 0.11
Cldn5O54942 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Gm26308-201ENSMUST00000157768 69 ntBASIC15.71■□□□□ 0.11
Cldn5O54942 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.71■□□□□ 0.11
Cldn5O54942 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cldn5O54942 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cldn5O54942 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn5O54942 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn5O54942 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.7■□□□□ 0.1
Cldn5O54942 Gm11025-201ENSMUST00000140773 466 ntBASIC15.7■□□□□ 0.1
Cldn5O54942 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn5O54942 Gm43767-201ENSMUST00000198933 381 ntBASIC15.7■□□□□ 0.1
Cldn5O54942 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.7■□□□□ 0.1
Cldn5O54942 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.7■□□□□ 0.1
Cldn5O54942 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn5O54942 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms