Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Dkk1O54908 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Dkk1O54908 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.57□□□□□ -0.24
Dkk1O54908 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.57□□□□□ -0.24
Dkk1O54908 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC13.57□□□□□ -0.24
Dkk1O54908 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Dkk1O54908 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Dkk1O54908 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.57□□□□□ -0.24
Dkk1O54908 Gm9023-201ENSMUST00000198408 1038 ntBASIC13.57□□□□□ -0.24
Dkk1O54908 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.57□□□□□ -0.24
Dkk1O54908 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 AC120394.1-201ENSMUST00000217153 351 ntBASIC13.57□□□□□ -0.24
Dkk1O54908 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC13.57□□□□□ -0.24
Dkk1O54908 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Dkk1O54908 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Dkk1O54908 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Dkk1O54908 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Dkk1O54908 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm24589-201ENSMUST00000116692 94 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm7350-201ENSMUST00000120964 636 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm8825-201ENSMUST00000182565 998 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm4518-201ENSMUST00000182638 718 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm29755-201ENSMUST00000196976 948 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm44237-201ENSMUST00000205183 936 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.56□□□□□ -0.24
Dkk1O54908 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 AC154747.1-201ENSMUST00000225265 239 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Dkk1O54908 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.56□□□□□ -0.24
Dkk1O54908 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.56□□□□□ -0.24
Dkk1O54908 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Dkk1O54908 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Dkk1O54908 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dkk1O54908 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Dkk1O54908 Gm12664-201ENSMUST00000118306 913 ntBASIC13.55□□□□□ -0.24
Dkk1O54908 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms