Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.34■□□□□ 0.05
ChkaO54804 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ChkaO54804 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ChkaO54804 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ChkaO54804 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ChkaO54804 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.34■□□□□ 0.05
ChkaO54804 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ChkaO54804 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.33■□□□□ 0.05
ChkaO54804 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ChkaO54804 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 Gm34391-201ENSMUST00000203706 907 ntBASIC15.33■□□□□ 0.04
ChkaO54804 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.33■□□□□ 0.04
ChkaO54804 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.33■□□□□ 0.04
ChkaO54804 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.33■□□□□ 0.04
ChkaO54804 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
ChkaO54804 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.33■□□□□ 0.04
ChkaO54804 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ChkaO54804 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ChkaO54804 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
ChkaO54804 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.33■□□□□ 0.04
ChkaO54804 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Celf4-206ENSMUST00000224553 1729 ntBASIC15.32■□□□□ 0.04
ChkaO54804 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.32■□□□□ 0.04
ChkaO54804 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.32■□□□□ 0.04
ChkaO54804 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.32■□□□□ 0.04
ChkaO54804 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.32■□□□□ 0.04
ChkaO54804 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.32■□□□□ 0.04
ChkaO54804 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.32■□□□□ 0.04
ChkaO54804 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ChkaO54804 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
ChkaO54804 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.31■□□□□ 0.04
ChkaO54804 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ChkaO54804 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ChkaO54804 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.31■□□□□ 0.04
ChkaO54804 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.31■□□□□ 0.04
ChkaO54804 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms