Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Per1O35973 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Per1O35973 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.41■□□□□ 0.22
Per1O35973 Gm11745-201ENSMUST00000121669 448 ntBASIC16.41■□□□□ 0.22
Per1O35973 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Per1O35973 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Per1O35973 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Per1O35973 Rprl2-201ENSMUST00000157150 290 ntBASIC16.41■□□□□ 0.22
Per1O35973 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.41■□□□□ 0.22
Per1O35973 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.41■□□□□ 0.22
Per1O35973 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.41■□□□□ 0.22
Per1O35973 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.41■□□□□ 0.22
Per1O35973 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Per1O35973 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Per1O35973 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Gm6973-201ENSMUST00000117080 721 ntBASIC16.4■□□□□ 0.22
Per1O35973 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Gm26308-201ENSMUST00000157768 69 ntBASIC16.4■□□□□ 0.22
Per1O35973 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Per1O35973 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.4■□□□□ 0.22
Per1O35973 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.4■□□□□ 0.22
Per1O35973 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Per1O35973 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Per1O35973 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Gm18889-201ENSMUST00000174284 929 ntBASIC16.39■□□□□ 0.21
Per1O35973 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Per1O35973 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Per1O35973 Gm8396-201ENSMUST00000057361 823 ntBASIC16.39■□□□□ 0.21
Per1O35973 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Per1O35973 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Per1O35973 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.38■□□□□ 0.21
Per1O35973 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Per1O35973 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.38■□□□□ 0.21
Per1O35973 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.38■□□□□ 0.21
Per1O35973 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Per1O35973 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Per1O35973 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Per1O35973 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Per1O35973 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.38■□□□□ 0.21
Per1O35973 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per1O35973 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms