Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Gm37055-201ENSMUST00000191866 133 ntBASIC11.87□□□□□ -0.51
Tnfsf11O35235 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.87□□□□□ -0.51
Tnfsf11O35235 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.87□□□□□ -0.51
Tnfsf11O35235 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.87□□□□□ -0.51
Tnfsf11O35235 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.86□□□□□ -0.51
Tnfsf11O35235 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf11O35235 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.85□□□□□ -0.51
Tnfsf11O35235 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.85□□□□□ -0.51
Tnfsf11O35235 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.85□□□□□ -0.51
Tnfsf11O35235 Gm13436-201ENSMUST00000120418 567 ntBASIC11.85□□□□□ -0.51
Tnfsf11O35235 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.85□□□□□ -0.51
Tnfsf11O35235 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.85□□□□□ -0.51
Tnfsf11O35235 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfsf11O35235 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms