Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col15a1O35206 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col15a1O35206 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.3■□□□□ 0.68
Col15a1O35206 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col15a1O35206 Mir1897-201ENSMUST00000122581 272 ntBASIC19.3■□□□□ 0.68
Col15a1O35206 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col15a1O35206 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col15a1O35206 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.3■□□□□ 0.68
Col15a1O35206 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.3■□□□□ 0.68
Col15a1O35206 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col15a1O35206 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col15a1O35206 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.29■□□□□ 0.68
Col15a1O35206 Gm12859-201ENSMUST00000117834 427 ntBASIC19.29■□□□□ 0.68
Col15a1O35206 Gm4875-201ENSMUST00000118257 786 ntBASIC19.29■□□□□ 0.68
Col15a1O35206 Gm14928-201ENSMUST00000120198 477 ntBASIC19.29■□□□□ 0.68
Col15a1O35206 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.29■□□□□ 0.68
Col15a1O35206 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col15a1O35206 Gm16476-201ENSMUST00000221544 139 ntBASIC19.29■□□□□ 0.68
Col15a1O35206 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.29■□□□□ 0.68
Col15a1O35206 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col15a1O35206 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col15a1O35206 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.28■□□□□ 0.68
Col15a1O35206 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.28■□□□□ 0.68
Col15a1O35206 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col15a1O35206 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
Col15a1O35206 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col15a1O35206 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col15a1O35206 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col15a1O35206 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Col15a1O35206 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.27■□□□□ 0.68
Col15a1O35206 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Gm22189-201ENSMUST00000103822 86 ntBASIC19.27■□□□□ 0.68
Col15a1O35206 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.27■□□□□ 0.68
Col15a1O35206 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.27■□□□□ 0.68
Col15a1O35206 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Col15a1O35206 Dupd1-202ENSMUST00000224735 548 ntBASIC19.27■□□□□ 0.68
Col15a1O35206 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col15a1O35206 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col15a1O35206 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Col15a1O35206 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Col15a1O35206 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Col15a1O35206 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col15a1O35206 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col15a1O35206 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Col15a1O35206 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.26■□□□□ 0.67
Col15a1O35206 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.26■□□□□ 0.67
Col15a1O35206 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Gm6912-201ENSMUST00000117218 544 ntBASIC19.26■□□□□ 0.67
Col15a1O35206 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.26■□□□□ 0.67
Col15a1O35206 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col15a1O35206 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col15a1O35206 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col15a1O35206 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col15a1O35206 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col15a1O35206 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col15a1O35206 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.25■□□□□ 0.67
Col15a1O35206 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col15a1O35206 Gm13464-201ENSMUST00000119418 935 ntBASIC19.25■□□□□ 0.67
Col15a1O35206 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col15a1O35206 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms