Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cx3cl1O35188 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cl1O35188 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.28□□□□□ -0.12
Cx3cl1O35188 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.28□□□□□ -0.12
Cx3cl1O35188 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cl1O35188 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.27□□□□□ -0.12
Cx3cl1O35188 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cx3cl1O35188 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.27□□□□□ -0.13
Cx3cl1O35188 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Gm18206-201ENSMUST00000207027 926 ntBASIC14.27□□□□□ -0.13
Cx3cl1O35188 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cx3cl1O35188 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.26□□□□□ -0.13
Cx3cl1O35188 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Gm4899-201ENSMUST00000178708 719 ntBASIC14.26□□□□□ -0.13
Cx3cl1O35188 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.26□□□□□ -0.13
Cx3cl1O35188 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 AW822252-206ENSMUST00000208904 237 ntBASIC14.26□□□□□ -0.13
Cx3cl1O35188 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Psmb5-202ENSMUST00000227257 622 ntBASIC14.26□□□□□ -0.13
Cx3cl1O35188 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Cx3cl1O35188 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms