Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm8463-201ENSMUST00000208573 613 ntBASIC9.44□□□□□ -0.9
Pkd1O08852 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Pkd1O08852 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm42900-201ENSMUST00000197184 2167 ntBASIC9.43□□□□□ -0.9
Pkd1O08852 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Pkd1O08852 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
Pkd1O08852 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Ntrk2-205ENSMUST00000224402 2284 ntBASIC9.43□□□□□ -0.9
Pkd1O08852 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Pkd1O08852 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC9.43□□□□□ -0.9
Pkd1O08852 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.43□□□□□ -0.9
Pkd1O08852 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.43□□□□□ -0.9
Pkd1O08852 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm7556-201ENSMUST00000201178 1084 ntBASIC9.43□□□□□ -0.9
Pkd1O08852 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.43□□□□□ -0.9
Pkd1O08852 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.43□□□□□ -0.9
Pkd1O08852 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC9.43□□□□□ -0.9
Pkd1O08852 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pkd1O08852 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.42□□□□□ -0.9
Pkd1O08852 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.42□□□□□ -0.9
Pkd1O08852 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm6222-201ENSMUST00000120787 396 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.42□□□□□ -0.9
Pkd1O08852 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Gm19220-201ENSMUST00000222682 803 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.42□□□□□ -0.9
Pkd1O08852 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 Gm4984-201ENSMUST00000115987 360 ntBASIC9.42□□□□□ -0.9
Pkd1O08852 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pkd1O08852 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms