Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ercc2O08811 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.53■□□□□ 0.08
Ercc2O08811 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.53■□□□□ 0.08
Ercc2O08811 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.53■□□□□ 0.08
Ercc2O08811 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.53■□□□□ 0.08
Ercc2O08811 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ercc2O08811 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Ercc2O08811 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.53■□□□□ 0.08
Ercc2O08811 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ercc2O08811 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ercc2O08811 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc2O08811 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.52■□□□□ 0.08
Ercc2O08811 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.52■□□□□ 0.08
Ercc2O08811 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.52■□□□□ 0.08
Ercc2O08811 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Gm27300-201ENSMUST00000184085 97 ntBASIC15.52■□□□□ 0.08
Ercc2O08811 Gm27335-201ENSMUST00000184758 97 ntBASIC15.52■□□□□ 0.08
Ercc2O08811 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Ercc2O08811 Gm18246-201ENSMUST00000221023 728 ntBASIC15.52■□□□□ 0.08
Ercc2O08811 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc2O08811 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.52■□□□□ 0.07
Ercc2O08811 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Ercc2O08811 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc2O08811 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ercc2O08811 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.51■□□□□ 0.07
Ercc2O08811 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.51■□□□□ 0.07
Ercc2O08811 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.51■□□□□ 0.07
Ercc2O08811 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc2O08811 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc2O08811 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.51■□□□□ 0.07
Ercc2O08811 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.51■□□□□ 0.07
Ercc2O08811 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.51■□□□□ 0.07
Ercc2O08811 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.51■□□□□ 0.07
Ercc2O08811 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc2O08811 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ercc2O08811 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ercc2O08811 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc2O08811 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ercc2O08811 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.5■□□□□ 0.07
Ercc2O08811 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.5■□□□□ 0.07
Ercc2O08811 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms