Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpsf4lE9Q2N0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Gm1401-201ENSMUST00000122048 772 ntBASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Psmb5-202ENSMUST00000227257 622 ntBASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4lE9Q2N0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4lE9Q2N0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4lE9Q2N0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4lE9Q2N0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm14140-201ENSMUST00000119999 995 ntBASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm44771-201ENSMUST00000206975 626 ntBASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms