Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.36□□□□□ -1.07
Herc1E9PZP8 Gm24644-201ENSMUST00000157114 139 ntBASIC8.36□□□□□ -1.07
Herc1E9PZP8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC8.36□□□□□ -1.07
Herc1E9PZP8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Herc1E9PZP8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Herc1E9PZP8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Herc1E9PZP8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm3318-201ENSMUST00000217604 1183 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm43081-201ENSMUST00000199082 1380 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm8318-201ENSMUST00000182954 872 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm8598-201ENSMUST00000221184 836 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 AC154462.2-201ENSMUST00000227519 370 ntBASIC8.35□□□□□ -1.07
Herc1E9PZP8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Herc1E9PZP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm11331-201ENSMUST00000119764 288 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm8894-201ENSMUST00000074642 666 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm8810-201ENSMUST00000172895 754 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm37008-201ENSMUST00000195712 319 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm10275-202ENSMUST00000168697 495 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Gm10275-201ENSMUST00000092620 635 ntBASIC8.34□□□□□ -1.07
Herc1E9PZP8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc1E9PZP8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Herc1E9PZP8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC8.34□□□□□ -1.08
Herc1E9PZP8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Herc1E9PZP8 Gm8546-201ENSMUST00000178288 1264 ntBASIC8.34□□□□□ -1.08
Herc1E9PZP8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC8.34□□□□□ -1.08
Herc1E9PZP8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Herc1E9PZP8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC8.33□□□□□ -1.08
Herc1E9PZP8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Gm16479-201ENSMUST00000121706 932 ntBASIC8.33□□□□□ -1.08
Herc1E9PZP8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.33□□□□□ -1.08
Herc1E9PZP8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc1E9PZP8 Gm25517-201ENSMUST00000083865 134 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms