Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Chd2E9PZM4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.54■□□□□ 0.88
Chd2E9PZM4 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.54■□□□□ 0.88
Chd2E9PZM4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm12742-201ENSMUST00000117326 410 ntBASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 AC154846.1-201ENSMUST00000226278 862 ntBASIC20.53■□□□□ 0.88
Chd2E9PZM4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.53■□□□□ 0.88
Chd2E9PZM4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm17420-201ENSMUST00000164753 153 ntBASIC20.53■□□□□ 0.88
Chd2E9PZM4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd2E9PZM4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Gm9257-201ENSMUST00000221254 232 ntBASIC20.53■□□□□ 0.88
Chd2E9PZM4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd2E9PZM4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Gm5049-201ENSMUST00000195878 1590 ntBASIC20.52■□□□□ 0.88
Chd2E9PZM4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Gm14660-201ENSMUST00000119809 575 ntBASIC20.52■□□□□ 0.88
Chd2E9PZM4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chd2E9PZM4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.52■□□□□ 0.88
Chd2E9PZM4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd2E9PZM4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd2E9PZM4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Gm6244-201ENSMUST00000178732 841 ntBASIC20.51■□□□□ 0.87
Chd2E9PZM4 Gm27839-201ENSMUST00000184242 106 ntBASIC20.51■□□□□ 0.87
Chd2E9PZM4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd2E9PZM4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Gm15460-201ENSMUST00000118147 391 ntBASIC20.5■□□□□ 0.87
Chd2E9PZM4 Gm15393-201ENSMUST00000120499 219 ntBASIC20.5■□□□□ 0.87
Chd2E9PZM4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.5■□□□□ 0.87
Chd2E9PZM4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC20.5■□□□□ 0.87
Chd2E9PZM4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd2E9PZM4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd2E9PZM4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd2E9PZM4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd2E9PZM4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.49■□□□□ 0.87
Chd2E9PZM4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.49■□□□□ 0.87
Chd2E9PZM4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms