Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Gm12895-201ENSMUST00000122214 226 ntBASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28043E0CXC2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Gm15165-201ENSMUST00000118140 502 ntBASIC15.25■□□□□ 0.03
Gm28043E0CXC2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm28043E0CXC2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm28043E0CXC2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm28043E0CXC2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms