Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm11539-201ENSMUST00000119837 557 ntBASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccnb1ip1D3Z3K2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccnb1ip1D3Z3K2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms