Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Otud4B2RRE7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.37□□□□□ -0.11
Otud4B2RRE7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.37□□□□□ -0.11
Otud4B2RRE7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.37□□□□□ -0.11
Otud4B2RRE7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.37□□□□□ -0.11
Otud4B2RRE7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Otud4B2RRE7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.36□□□□□ -0.11
Otud4B2RRE7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.36□□□□□ -0.11
Otud4B2RRE7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.36□□□□□ -0.11
Otud4B2RRE7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Otud4B2RRE7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Otud4B2RRE7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms