Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.2□□□□□ -0.46
Chd6A3KFM7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.2□□□□□ -0.46
Chd6A3KFM7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.2□□□□□ -0.46
Chd6A3KFM7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.2□□□□□ -0.46
Chd6A3KFM7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chd6A3KFM7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.19□□□□□ -0.46
Chd6A3KFM7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gm11628-201ENSMUST00000117568 171 ntBASIC12.19□□□□□ -0.46
Chd6A3KFM7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Mir6979-201ENSMUST00000183927 56 ntBASIC12.19□□□□□ -0.46
Chd6A3KFM7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd6A3KFM7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm12997-201ENSMUST00000120207 640 ntBASIC12.18□□□□□ -0.46
Chd6A3KFM7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.18□□□□□ -0.46
Chd6A3KFM7 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.18□□□□□ -0.46
Chd6A3KFM7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd6A3KFM7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms