Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Igkv8-27A0A0G2JF28 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm6257-201ENSMUST00000163864 910 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm7367-201ENSMUST00000057611 492 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm45779-201ENSMUST00000212189 4064 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm45003-201ENSMUST00000205875 2158 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ntrk2-208ENSMUST00000225583 2719 ntBASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Igkv8-27A0A0G2JF28 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Matn2-206ENSMUST00000228570 2798 ntBASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm43859-201ENSMUST00000200075 1412 ntBASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.53□□□□□ -0.88
Igkv8-27A0A0G2JF28 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Igkv8-27A0A0G2JF28 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Igkv8-27A0A0G2JF28 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Igkv8-27A0A0G2JF28 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Igkv8-27A0A0G2JF28 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms