Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Psmb5-202ENSMUST00000227257 622 ntBASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm2213-201ENSMUST00000197485 688 ntBASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm19164-201ENSMUST00000210667 640 ntBASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Asic1-205ENSMUST00000228185 1818 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm14140-201ENSMUST00000119999 995 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms