Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trbv13-1A0A0B4J1P8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm12350-201ENSMUST00000121208 462 ntBASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm1401-201ENSMUST00000122048 772 ntBASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Mir5126-201ENSMUST00000175513 77 ntBASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm11780-201ENSMUST00000136880 516 ntBASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm6089-201ENSMUST00000197666 938 ntBASIC11.32□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms