Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Carlr-201ENSMUST00000181515 2574 ntBASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-3A0A0B4J1H2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-3A0A0B4J1H2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms