Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav21-dv12A0A075B6C4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm15372-201ENSMUST00000120729 834 ntBASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm8655-201ENSMUST00000221159 852 ntBASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav21-dv12A0A075B6C4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav21-dv12A0A075B6C4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm8097-201ENSMUST00000117903 829 ntBASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav21-dv12A0A075B6C4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms