Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm10052-201ENSMUST00000168019 960 ntBASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm7729-201ENSMUST00000050143 801 ntBASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6n-6A0A075B6B2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6n-6A0A075B6B2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6n-6A0A075B6B2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.34□□□□□ -0.59
Trav6n-6A0A075B6B2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms