Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm6257-201ENSMUST00000163864 910 ntBASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Rps4l-201ENSMUST00000071745 943 ntBASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-7A0A075B6B0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms