Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav18A0A075B656 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav18A0A075B656 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.46□□□□□ -0.42
Trav18A0A075B656 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav18A0A075B656 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Gm33142-201ENSMUST00000193913 867 ntBASIC12.45□□□□□ -0.42
Trav18A0A075B656 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.45□□□□□ -0.42
Trav18A0A075B656 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav18A0A075B656 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.45□□□□□ -0.42
Trav18A0A075B656 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.44□□□□□ -0.42
Trav18A0A075B656 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms