Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav17A0A075B655 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav17A0A075B655 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm9013-201ENSMUST00000132939 882 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm8825-201ENSMUST00000182565 998 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm4518-201ENSMUST00000182638 718 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.06□□□□□ -0.48
Trav17A0A075B655 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav17A0A075B655 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav17A0A075B655 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms