Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.77□□□□□ -0.53
Trav16A0A075B653 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.76□□□□□ -0.53
Trav16A0A075B653 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gm10812-201ENSMUST00000099864 546 ntBASIC11.76□□□□□ -0.53
Trav16A0A075B653 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav16A0A075B653 Efs-202ENSMUST00000227037 2540 ntBASIC11.76□□□□□ -0.53
Trav16A0A075B653 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Mir5130-201ENSMUST00000175160 84 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm37722-201ENSMUST00000193757 208 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm7367-201ENSMUST00000057611 492 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.75□□□□□ -0.53
Trav16A0A075B653 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav16A0A075B653 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms