Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 BC037039-201ENSMUST00000192003 2205 ntBASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Gm7506-201ENSMUST00000207758 815 ntBASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Grk6-207ENSMUST00000225925 2769 ntBASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-4A0A075B652 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Gm4459-201ENSMUST00000118750 468 ntBASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Gm27357-201ENSMUST00000183754 135 ntBASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Gm19164-201ENSMUST00000210667 640 ntBASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms