Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rprl3-201ENSMUST00000157400 290 ntBASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms