Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-1A0A075B5Z7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.03□□□□□ -0.32
Trav5-1A0A075B5Z7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-1A0A075B5Z7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm25911-201ENSMUST00000157621 56 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm45747-201ENSMUST00000212203 999 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-1A0A075B5Z7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-1A0A075B5Z7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 H2af-ps-201ENSMUST00000119066 295 ntBASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-1A0A075B5Z7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms