Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Gm11687-201ENSMUST00000118911 886 ntBASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufs4Q9CXZ1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufs4Q9CXZ1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufs4Q9CXZ1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.44■■□□□ 1.02
Ndufs4Q9CXZ1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufs4Q9CXZ1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufs4Q9CXZ1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufs4Q9CXZ1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufs4Q9CXZ1 Gm11175-201ENSMUST00000116172 543 ntBASIC21.43■■□□□ 1.02
Ndufs4Q9CXZ1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufs4Q9CXZ1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufs4Q9CXZ1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufs4Q9CXZ1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ndufs4Q9CXZ1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ndufs4Q9CXZ1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.41■■□□□ 1.02
Ndufs4Q9CXZ1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ndufs4Q9CXZ1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndufs4Q9CXZ1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.4■■□□□ 1.02
Ndufs4Q9CXZ1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ndufs4Q9CXZ1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ndufs4Q9CXZ1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Ndufs4Q9CXZ1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufs4Q9CXZ1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufs4Q9CXZ1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufs4Q9CXZ1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufs4Q9CXZ1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ndufs4Q9CXZ1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufs4Q9CXZ1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufs4Q9CXZ1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufs4Q9CXZ1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufs4Q9CXZ1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufs4Q9CXZ1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufs4Q9CXZ1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ndufs4Q9CXZ1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ndufs4Q9CXZ1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufs4Q9CXZ1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.34■■□□□ 1.01
Ndufs4Q9CXZ1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufs4Q9CXZ1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ndufs4Q9CXZ1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufs4Q9CXZ1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ndufs4Q9CXZ1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndufs4Q9CXZ1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndufs4Q9CXZ1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.33■■□□□ 1
Ndufs4Q9CXZ1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ndufs4Q9CXZ1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufs4Q9CXZ1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.31■■□□□ 1
Ndufs4Q9CXZ1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufs4Q9CXZ1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ndufs4Q9CXZ1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufs4Q9CXZ1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufs4Q9CXZ1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufs4Q9CXZ1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufs4Q9CXZ1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufs4Q9CXZ1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.3■■□□□ 1
Ndufs4Q9CXZ1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndufs4Q9CXZ1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufs4Q9CXZ1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms