Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga4Q91XY4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga4Q91XY4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdhga4Q91XY4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga4Q91XY4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga4Q91XY4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga4Q91XY4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Pcdhga4Q91XY4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga4Q91XY4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga4Q91XY4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhga4Q91XY4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga4Q91XY4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhga4Q91XY4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Terc-201ENSMUST00000082862 423 ntBASIC21.88■■□□□ 1.09
Pcdhga4Q91XY4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga4Q91XY4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.86■■□□□ 1.09
Pcdhga4Q91XY4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga4Q91XY4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga4Q91XY4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga4Q91XY4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga4Q91XY4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Pcdhga4Q91XY4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhga4Q91XY4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga4Q91XY4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhga4Q91XY4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga4Q91XY4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga4Q91XY4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhga4Q91XY4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhga4Q91XY4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga4Q91XY4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcdhga4Q91XY4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga4Q91XY4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga4Q91XY4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga4Q91XY4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga4Q91XY4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhga4Q91XY4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga4Q91XY4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhga4Q91XY4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
Pcdhga4Q91XY4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga4Q91XY4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga4Q91XY4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga4Q91XY4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdhga4Q91XY4 Cap2-205ENSMUST00000225824 1634 ntBASIC21.77■■□□□ 1.08
Pcdhga4Q91XY4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhga4Q91XY4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga4Q91XY4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga4Q91XY4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhga4Q91XY4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga4Q91XY4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Pcdhga4Q91XY4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhga4Q91XY4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga4Q91XY4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga4Q91XY4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga4Q91XY4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.75■■□□□ 1.07
Pcdhga4Q91XY4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga4Q91XY4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga4Q91XY4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga4Q91XY4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhga4Q91XY4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms