Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga9Q91XX9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga9Q91XX9 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.23■■□□□ 1.15
Pcdhga9Q91XX9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhga9Q91XX9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhga9Q91XX9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhga9Q91XX9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga9Q91XX9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga9Q91XX9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga9Q91XX9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga9Q91XX9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga9Q91XX9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhga9Q91XX9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga9Q91XX9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga9Q91XX9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga9Q91XX9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga9Q91XX9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
Pcdhga9Q91XX9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdhga9Q91XX9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga9Q91XX9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga9Q91XX9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhga9Q91XX9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga9Q91XX9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga9Q91XX9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.17■■□□□ 1.14
Pcdhga9Q91XX9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga9Q91XX9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.16■■□□□ 1.14
Pcdhga9Q91XX9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.15■■□□□ 1.14
Pcdhga9Q91XX9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga9Q91XX9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Pcdhga9Q91XX9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga9Q91XX9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.14
Pcdhga9Q91XX9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga9Q91XX9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga9Q91XX9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga9Q91XX9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Pcdhga9Q91XX9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga9Q91XX9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga9Q91XX9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhga9Q91XX9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga9Q91XX9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga9Q91XX9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhga9Q91XX9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Pcdhga9Q91XX9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhga9Q91XX9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhga9Q91XX9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pcdhga9Q91XX9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga9Q91XX9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga9Q91XX9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Pcdhga9Q91XX9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.07■■□□□ 1.12
Pcdhga9Q91XX9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga9Q91XX9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms