Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trex1Q91XB0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trex1Q91XB0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Trex1Q91XB0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Trex1Q91XB0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Trex1Q91XB0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.21■■□□□ 1.79
Trex1Q91XB0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trex1Q91XB0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trex1Q91XB0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.2■■□□□ 1.78
Trex1Q91XB0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trex1Q91XB0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.19■■□□□ 1.78
Trex1Q91XB0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trex1Q91XB0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.19■■□□□ 1.78
Trex1Q91XB0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trex1Q91XB0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Trex1Q91XB0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
Trex1Q91XB0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trex1Q91XB0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trex1Q91XB0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Trex1Q91XB0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trex1Q91XB0 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.17■■□□□ 1.78
Trex1Q91XB0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trex1Q91XB0 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.16■■□□□ 1.78
Trex1Q91XB0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Trex1Q91XB0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Trex1Q91XB0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trex1Q91XB0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trex1Q91XB0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.14■■□□□ 1.78
Trex1Q91XB0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trex1Q91XB0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trex1Q91XB0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trex1Q91XB0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trex1Q91XB0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trex1Q91XB0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trex1Q91XB0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trex1Q91XB0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Trex1Q91XB0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.12■■□□□ 1.77
Trex1Q91XB0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trex1Q91XB0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trex1Q91XB0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trex1Q91XB0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trex1Q91XB0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Trex1Q91XB0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trex1Q91XB0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Trex1Q91XB0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Trex1Q91XB0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Trex1Q91XB0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trex1Q91XB0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trex1Q91XB0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trex1Q91XB0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trex1Q91XB0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trex1Q91XB0 Gm13238-201ENSMUST00000117655 780 ntBASIC26.05■■□□□ 1.76
Trex1Q91XB0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Trex1Q91XB0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.05■■□□□ 1.76
Trex1Q91XB0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trex1Q91XB0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trex1Q91XB0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trex1Q91XB0 Gm15546-201ENSMUST00000122095 826 ntBASIC26.04■■□□□ 1.76
Trex1Q91XB0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trex1Q91XB0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trex1Q91XB0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.04■■□□□ 1.76
Trex1Q91XB0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trex1Q91XB0 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.03■■□□□ 1.76
Trex1Q91XB0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.03■■□□□ 1.76
Trex1Q91XB0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.03■■□□□ 1.76
Trex1Q91XB0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Trex1Q91XB0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trex1Q91XB0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Trex1Q91XB0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Trex1Q91XB0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.01■■□□□ 1.75
Trex1Q91XB0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.01■■□□□ 1.75
Trex1Q91XB0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trex1Q91XB0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trex1Q91XB0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.99■■□□□ 1.75
Trex1Q91XB0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Trex1Q91XB0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Trex1Q91XB0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Trex1Q91XB0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trex1Q91XB0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trex1Q91XB0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trex1Q91XB0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Trex1Q91XB0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trex1Q91XB0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.96■■□□□ 1.75
Trex1Q91XB0 Gm43566-201ENSMUST00000196851 808 ntBASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms