Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn1Q8K445 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn1Q8K445 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clrn1Q8K445 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clrn1Q8K445 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.16■□□□□ 0.98
Clrn1Q8K445 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn1Q8K445 Terc-201ENSMUST00000082862 423 ntBASIC21.15■□□□□ 0.98
Clrn1Q8K445 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn1Q8K445 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clrn1Q8K445 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clrn1Q8K445 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clrn1Q8K445 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clrn1Q8K445 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clrn1Q8K445 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clrn1Q8K445 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clrn1Q8K445 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clrn1Q8K445 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clrn1Q8K445 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clrn1Q8K445 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.11■□□□□ 0.97
Clrn1Q8K445 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Clrn1Q8K445 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Scarna2-201ENSMUST00000157560 414 ntBASIC21.09■□□□□ 0.97
Clrn1Q8K445 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clrn1Q8K445 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.08■□□□□ 0.97
Clrn1Q8K445 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clrn1Q8K445 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Clrn1Q8K445 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.08■□□□□ 0.96
Clrn1Q8K445 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clrn1Q8K445 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clrn1Q8K445 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clrn1Q8K445 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clrn1Q8K445 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clrn1Q8K445 Gm9806-201ENSMUST00000051080 552 ntBASIC21.06■□□□□ 0.96
Clrn1Q8K445 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clrn1Q8K445 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clrn1Q8K445 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clrn1Q8K445 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clrn1Q8K445 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clrn1Q8K445 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clrn1Q8K445 Gm16437-201ENSMUST00000025669 507 ntBASIC21.04■□□□□ 0.96
Clrn1Q8K445 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clrn1Q8K445 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Clrn1Q8K445 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.96
Clrn1Q8K445 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.02■□□□□ 0.96
Clrn1Q8K445 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clrn1Q8K445 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clrn1Q8K445 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
Clrn1Q8K445 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clrn1Q8K445 Gm11687-201ENSMUST00000118911 886 ntBASIC21.01■□□□□ 0.95
Clrn1Q8K445 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clrn1Q8K445 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clrn1Q8K445 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clrn1Q8K445 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Clrn1Q8K445 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21■□□□□ 0.95
Clrn1Q8K445 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms