Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SprnQ8BWU1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SprnQ8BWU1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.1■□□□□ 0.81
SprnQ8BWU1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SprnQ8BWU1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.1■□□□□ 0.81
SprnQ8BWU1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SprnQ8BWU1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SprnQ8BWU1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SprnQ8BWU1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SprnQ8BWU1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SprnQ8BWU1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SprnQ8BWU1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SprnQ8BWU1 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.08■□□□□ 0.81
SprnQ8BWU1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SprnQ8BWU1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SprnQ8BWU1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.07■□□□□ 0.8
SprnQ8BWU1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SprnQ8BWU1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.06■□□□□ 0.8
SprnQ8BWU1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SprnQ8BWU1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SprnQ8BWU1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SprnQ8BWU1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SprnQ8BWU1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
SprnQ8BWU1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SprnQ8BWU1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SprnQ8BWU1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SprnQ8BWU1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SprnQ8BWU1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.02■□□□□ 0.79
SprnQ8BWU1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SprnQ8BWU1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SprnQ8BWU1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SprnQ8BWU1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SprnQ8BWU1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SprnQ8BWU1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SprnQ8BWU1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SprnQ8BWU1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SprnQ8BWU1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.99■□□□□ 0.79
SprnQ8BWU1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SprnQ8BWU1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SprnQ8BWU1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SprnQ8BWU1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SprnQ8BWU1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SprnQ8BWU1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SprnQ8BWU1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SprnQ8BWU1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SprnQ8BWU1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SprnQ8BWU1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SprnQ8BWU1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.95■□□□□ 0.78
SprnQ8BWU1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SprnQ8BWU1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SprnQ8BWU1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SprnQ8BWU1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SprnQ8BWU1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.94■□□□□ 0.78
SprnQ8BWU1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SprnQ8BWU1 Gm6821-201ENSMUST00000107540 542 ntBASIC19.93■□□□□ 0.78
SprnQ8BWU1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SprnQ8BWU1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SprnQ8BWU1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SprnQ8BWU1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SprnQ8BWU1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SprnQ8BWU1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SprnQ8BWU1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.92■□□□□ 0.78
SprnQ8BWU1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.92■□□□□ 0.78
SprnQ8BWU1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SprnQ8BWU1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SprnQ8BWU1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SprnQ8BWU1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SprnQ8BWU1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Gm8503-201ENSMUST00000118131 455 ntBASIC19.91■□□□□ 0.78
SprnQ8BWU1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.91■□□□□ 0.78
SprnQ8BWU1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms