Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim45Q6PFY8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim45Q6PFY8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.09■□□□□ 0.97
Trim45Q6PFY8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim45Q6PFY8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim45Q6PFY8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim45Q6PFY8 Gm11687-201ENSMUST00000118911 886 ntBASIC21.08■□□□□ 0.97
Trim45Q6PFY8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim45Q6PFY8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim45Q6PFY8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim45Q6PFY8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim45Q6PFY8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.07■□□□□ 0.96
Trim45Q6PFY8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim45Q6PFY8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim45Q6PFY8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Trim45Q6PFY8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim45Q6PFY8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim45Q6PFY8 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.05■□□□□ 0.96
Trim45Q6PFY8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.05■□□□□ 0.96
Trim45Q6PFY8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.05■□□□□ 0.96
Trim45Q6PFY8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim45Q6PFY8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim45Q6PFY8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim45Q6PFY8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim45Q6PFY8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim45Q6PFY8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim45Q6PFY8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim45Q6PFY8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim45Q6PFY8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim45Q6PFY8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trim45Q6PFY8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim45Q6PFY8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.01■□□□□ 0.95
Trim45Q6PFY8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim45Q6PFY8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim45Q6PFY8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim45Q6PFY8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim45Q6PFY8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim45Q6PFY8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim45Q6PFY8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim45Q6PFY8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim45Q6PFY8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim45Q6PFY8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim45Q6PFY8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim45Q6PFY8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim45Q6PFY8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim45Q6PFY8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim45Q6PFY8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim45Q6PFY8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim45Q6PFY8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim45Q6PFY8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim45Q6PFY8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim45Q6PFY8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Trim45Q6PFY8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim45Q6PFY8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Gm12366-201ENSMUST00000121722 873 ntBASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Gm5786-201ENSMUST00000085368 882 ntBASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms