Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.78■■□□□ 1.24
Sdf4Q61112 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sdf4Q61112 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sdf4Q61112 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.77■■□□□ 1.24
Sdf4Q61112 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Sdf4Q61112 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.23
Sdf4Q61112 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sdf4Q61112 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sdf4Q61112 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Sdf4Q61112 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sdf4Q61112 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sdf4Q61112 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sdf4Q61112 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.74■■□□□ 1.23
Sdf4Q61112 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.73■■□□□ 1.23
Sdf4Q61112 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sdf4Q61112 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sdf4Q61112 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sdf4Q61112 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sdf4Q61112 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.71■■□□□ 1.23
Sdf4Q61112 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Sdf4Q61112 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sdf4Q61112 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.7■■□□□ 1.22
Sdf4Q61112 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sdf4Q61112 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Scarna2-201ENSMUST00000157560 414 ntBASIC22.69■■□□□ 1.22
Sdf4Q61112 Gm9806-201ENSMUST00000051080 552 ntBASIC22.69■■□□□ 1.22
Sdf4Q61112 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sdf4Q61112 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sdf4Q61112 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Sdf4Q61112 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sdf4Q61112 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.67■■□□□ 1.22
Sdf4Q61112 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sdf4Q61112 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Sdf4Q61112 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sdf4Q61112 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.66■■□□□ 1.22
Sdf4Q61112 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.65■■□□□ 1.22
Sdf4Q61112 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sdf4Q61112 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sdf4Q61112 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sdf4Q61112 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sdf4Q61112 Gm11687-201ENSMUST00000118911 886 ntBASIC22.64■■□□□ 1.21
Sdf4Q61112 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Sdf4Q61112 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sdf4Q61112 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sdf4Q61112 Gm16437-201ENSMUST00000025669 507 ntBASIC22.62■■□□□ 1.21
Sdf4Q61112 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sdf4Q61112 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.61■■□□□ 1.21
Sdf4Q61112 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sdf4Q61112 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms