Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Lhx4P53776 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx4P53776 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx4P53776 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx4P53776 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Lhx4P53776 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.82■□□□□ 0.6
Lhx4P53776 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx4P53776 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lhx4P53776 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx4P53776 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx4P53776 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.81■□□□□ 0.6
Lhx4P53776 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lhx4P53776 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx4P53776 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lhx4P53776 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.81■□□□□ 0.6
Lhx4P53776 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx4P53776 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lhx4P53776 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.8■□□□□ 0.6
Lhx4P53776 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx4P53776 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx4P53776 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx4P53776 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.8■□□□□ 0.6
Lhx4P53776 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Lhx4P53776 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx4P53776 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx4P53776 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Mir6538-201ENSMUST00000183713 110 ntBASIC18.79■□□□□ 0.6
Lhx4P53776 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx4P53776 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.79■□□□□ 0.6
Lhx4P53776 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx4P53776 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx4P53776 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx4P53776 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx4P53776 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx4P53776 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx4P53776 Scarna2-201ENSMUST00000157560 414 ntBASIC18.77■□□□□ 0.6
Lhx4P53776 Gm45364-201ENSMUST00000210883 159 ntBASIC18.77■□□□□ 0.6
Lhx4P53776 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx4P53776 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Lhx4P53776 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.76■□□□□ 0.59
Lhx4P53776 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx4P53776 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lhx4P53776 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx4P53776 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
Lhx4P53776 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx4P53776 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx4P53776 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx4P53776 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lhx4P53776 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx4P53776 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lhx4P53776 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx4P53776 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx4P53776 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
Lhx4P53776 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx4P53776 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.73■□□□□ 0.59
Lhx4P53776 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lhx4P53776 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx4P53776 Gm9806-201ENSMUST00000051080 552 ntBASIC18.73■□□□□ 0.59
Lhx4P53776 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.73■□□□□ 0.59
Lhx4P53776 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 Gm11687-201ENSMUST00000118911 886 ntBASIC18.72■□□□□ 0.59
Lhx4P53776 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx4P53776 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Lhx4P53776 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx4P53776 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
Lhx4P53776 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx4P53776 Gm16437-201ENSMUST00000025669 507 ntBASIC18.71■□□□□ 0.59
Lhx4P53776 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx4P53776 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.71■□□□□ 0.59
Lhx4P53776 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx4P53776 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.7■□□□□ 0.58
Lhx4P53776 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx4P53776 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx4P53776 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx4P53776 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx4P53776 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms