Protein–RNA interactions for Protein: C0HKE3

Hist1h2ad, Histone H2A type 1-D, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2adC0HKE3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2adC0HKE3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2adC0HKE3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2adC0HKE3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2adC0HKE3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.46■□□□□ 0.87
Hist1h2adC0HKE3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2adC0HKE3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hist1h2adC0HKE3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hist1h2adC0HKE3 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Gm7432-201ENSMUST00000210343 879 ntBASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2adC0HKE3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2adC0HKE3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.44■□□□□ 0.86
Hist1h2adC0HKE3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2adC0HKE3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2adC0HKE3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2adC0HKE3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2adC0HKE3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2adC0HKE3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.42■□□□□ 0.86
Hist1h2adC0HKE3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.42■□□□□ 0.86
Hist1h2adC0HKE3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.42■□□□□ 0.86
Hist1h2adC0HKE3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2adC0HKE3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2adC0HKE3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hist1h2adC0HKE3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2adC0HKE3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2adC0HKE3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hist1h2adC0HKE3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h2adC0HKE3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Hist1h2adC0HKE3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h2adC0HKE3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hist1h2adC0HKE3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2adC0HKE3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hist1h2adC0HKE3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.39■□□□□ 0.85
Hist1h2adC0HKE3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2adC0HKE3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2adC0HKE3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2adC0HKE3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.38■□□□□ 0.85
Hist1h2adC0HKE3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2adC0HKE3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2adC0HKE3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2adC0HKE3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2adC0HKE3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2adC0HKE3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2adC0HKE3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2adC0HKE3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.35■□□□□ 0.85
Hist1h2adC0HKE3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hist1h2adC0HKE3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.34■□□□□ 0.85
Hist1h2adC0HKE3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hist1h2adC0HKE3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h2adC0HKE3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h2adC0HKE3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h2adC0HKE3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Hist1h2adC0HKE3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2adC0HKE3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2adC0HKE3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2adC0HKE3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2adC0HKE3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2adC0HKE3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2adC0HKE3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2adC0HKE3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2adC0HKE3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2adC0HKE3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2adC0HKE3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.29■□□□□ 0.84
Hist1h2adC0HKE3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h2adC0HKE3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hist1h2adC0HKE3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.28■□□□□ 0.84
Hist1h2adC0HKE3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h2adC0HKE3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.28■□□□□ 0.84
Hist1h2adC0HKE3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h2adC0HKE3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms