Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h2abC0HKE1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2abC0HKE1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2abC0HKE1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2abC0HKE1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.46■□□□□ 0.87
Hist1h2abC0HKE1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h2abC0HKE1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hist1h2abC0HKE1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hist1h2abC0HKE1 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h2abC0HKE1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2abC0HKE1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.44■□□□□ 0.86
Hist1h2abC0HKE1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hist1h2abC0HKE1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2abC0HKE1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2abC0HKE1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h2abC0HKE1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2abC0HKE1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.42■□□□□ 0.86
Hist1h2abC0HKE1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.42■□□□□ 0.86
Hist1h2abC0HKE1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.42■□□□□ 0.86
Hist1h2abC0HKE1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h2abC0HKE1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2abC0HKE1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hist1h2abC0HKE1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2abC0HKE1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h2abC0HKE1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hist1h2abC0HKE1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h2abC0HKE1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Hist1h2abC0HKE1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h2abC0HKE1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hist1h2abC0HKE1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2abC0HKE1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hist1h2abC0HKE1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.39■□□□□ 0.85
Hist1h2abC0HKE1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2abC0HKE1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h2abC0HKE1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2abC0HKE1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.38■□□□□ 0.85
Hist1h2abC0HKE1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2abC0HKE1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h2abC0HKE1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2abC0HKE1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2abC0HKE1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2abC0HKE1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hist1h2abC0HKE1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h2abC0HKE1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.35■□□□□ 0.85
Hist1h2abC0HKE1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hist1h2abC0HKE1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.34■□□□□ 0.85
Hist1h2abC0HKE1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hist1h2abC0HKE1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h2abC0HKE1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h2abC0HKE1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h2abC0HKE1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Hist1h2abC0HKE1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2abC0HKE1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2abC0HKE1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h2abC0HKE1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2abC0HKE1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2abC0HKE1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist1h2abC0HKE1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2abC0HKE1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2abC0HKE1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2abC0HKE1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h2abC0HKE1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.29■□□□□ 0.84
Hist1h2abC0HKE1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist1h2abC0HKE1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hist1h2abC0HKE1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.28■□□□□ 0.84
Hist1h2abC0HKE1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h2abC0HKE1 Mir3960-201ENSMUST00000198213 73 ntBASIC20.28■□□□□ 0.84
Hist1h2abC0HKE1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h2abC0HKE1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms