Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4-2A0A075B638 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4-2A0A075B638 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-2A0A075B638 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4-2A0A075B638 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav4-2A0A075B638 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav4-2A0A075B638 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav4-2A0A075B638 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav4-2A0A075B638 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav4-2A0A075B638 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav4-2A0A075B638 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav4-2A0A075B638 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-2A0A075B638 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4-2A0A075B638 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav4-2A0A075B638 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4-2A0A075B638 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.86■□□□□ 0.45
Trav4-2A0A075B638 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav4-2A0A075B638 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav4-2A0A075B638 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Trav4-2A0A075B638 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-2A0A075B638 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-2A0A075B638 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav4-2A0A075B638 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trav4-2A0A075B638 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav4-2A0A075B638 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav4-2A0A075B638 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav4-2A0A075B638 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav4-2A0A075B638 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav4-2A0A075B638 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-2A0A075B638 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-2A0A075B638 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4-2A0A075B638 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-2A0A075B638 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-2A0A075B638 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav4-2A0A075B638 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-2A0A075B638 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-2A0A075B638 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav4-2A0A075B638 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav4-2A0A075B638 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav4-2A0A075B638 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trav4-2A0A075B638 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-2A0A075B638 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-2A0A075B638 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms