Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7n-5A0A075B604 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7n-5A0A075B604 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7n-5A0A075B604 Gm44428-201ENSMUST00000204474 874 ntBASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Trav7n-5A0A075B604 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7n-5A0A075B604 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Trav7n-5A0A075B604 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7n-5A0A075B604 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav7n-5A0A075B604 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav7n-5A0A075B604 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7n-5A0A075B604 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7n-5A0A075B604 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trav7n-5A0A075B604 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.45■□□□□ 0.54
Trav7n-5A0A075B604 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.44■□□□□ 0.54
Trav7n-5A0A075B604 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7n-5A0A075B604 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-5A0A075B604 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-5A0A075B604 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-5A0A075B604 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav7n-5A0A075B604 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-5A0A075B604 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav7n-5A0A075B604 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7n-5A0A075B604 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7n-5A0A075B604 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7n-5A0A075B604 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7n-5A0A075B604 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7n-5A0A075B604 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.38■□□□□ 0.53
Trav7n-5A0A075B604 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7n-5A0A075B604 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav7n-5A0A075B604 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7n-5A0A075B604 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.37■□□□□ 0.53
Trav7n-5A0A075B604 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7n-5A0A075B604 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7n-5A0A075B604 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav7n-5A0A075B604 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-5A0A075B604 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trav7n-5A0A075B604 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7n-5A0A075B604 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7n-5A0A075B604 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7n-5A0A075B604 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7n-5A0A075B604 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.33■□□□□ 0.52
Trav7n-5A0A075B604 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Gm12366-201ENSMUST00000121722 873 ntBASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.32■□□□□ 0.52
Trav7n-5A0A075B604 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms