Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClcnkaQ9WUB7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Gm28659-201ENSMUST00000188013 759 ntBASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.02□□□□□ -0.17
ClcnkaQ9WUB7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClcnkaQ9WUB7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Gm13884-201ENSMUST00000118103 829 ntBASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 AC122024.2-201ENSMUST00000220086 871 ntBASIC14□□□□□ -0.17
ClcnkaQ9WUB7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14□□□□□ -0.17
ClcnkaQ9WUB7 AC159106.1-201ENSMUST00000224421 690 ntBASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ClcnkaQ9WUB7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms