Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atp6ap1Q9R1Q9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atp6ap1Q9R1Q9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Atp6ap1Q9R1Q9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.86□□□□□ -0.03
Atp6ap1Q9R1Q9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms